Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7007550 chr8:12607629 C/T 0.000153 289 27.98 24.67 25.62 KM Plot
KIRP rs7028134 chr9:123326458 A/T 4.91E-6 288 10.77 21.63 26.37 KM Plot
KIRP rs7070233 chr10:88263120 T/C 5.8E-8 285 26.38 23.1 9.77 KM Plot
KIRP rs7074380 chr10:43466121 T/A 1.41E-5 281 26.37 24.67 11.43 KM Plot
KIRP rs7081990 chr10:88292459 C/T 4.04E-7 284 26.37 23.97 9.77 KM Plot
KIRP rs70943013 chr2:100924690 GGT/G 0.000172 285 26.92 25.7 25.15 KM Plot
KIRP rs7097557 chr10:43466246 C/T 1.41E-5 281 26.37 24.67 11.43 KM Plot
KIRP rs7097647 chr10:43108905 A/G 7.16E-5 288 25.4 27.47 11.43 KM Plot
KIRP rs70983923 chr6:27914359 AAATGAACTGAAGGAGAGGTCCC/A 2.01E-8 288 25.62 26.4 9.77 KM Plot
KIRP rs71026045 chr10:124799872 AAAT/A 3.24E-6 287 19.63 26.4 25.6 KM Plot
KIRP rs7113042 chr11:78035832 C/T 4.81E-6 289 17.73 26.83 26.2 KM Plot
KIRP rs71152907 chr16:8712196 A/ATTTTGTT 2.4E-5 286 5.72 34.3 25.57 KM Plot
KIRP rs71152909 chr16:8715196 T/TAAATAAAC 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs71206067 chr6:26903379 C/T 2.25E-8 284 25.57 29.77 9.77 KM Plot
KIRP rs71365878 chr17:56422603 CACA/C 4.46E-5 287 25.97 26.4 11.47 KM Plot